Publications

An exact mathematical description of computation with transient spatiotemporal dynamics in a complex-valued neural network

RC Budzinski, AN Busch, S Mestern, E Martin, LHB Liboni, FW Pasini, ...

Communications Physics 7 (1), 239, 2024

2024

Machine learning based DNA melt curve profiling enables automated novel genotype detection

A Boussina, L Langouche, AC Obirieze, M Sinha, H Mack, W Leineweber, ...

BMC bioinformatics 25 (1), 185, 2024

2024

Emerging wearable technologies for multisystem monitoring and treatment of Parkinson’s disease: a narrative review

YM Kehnemouyi, TP Coleman, PA Tass

Frontiers in Network Physiology 4, 1354211, 2024

2024

Non-invasive ventral cervical magnetoneurography as a proxy of in vivo lipopolysaccharide-induced inflammation

Y Bu, J Burks, K Yang, J Prince, A Borna, CL Coe, A Simmons, XM Tu, ...

Communications Biology 7 (1), 893, 2024

2024

An Efficient Framework for Solving a Convex, State-Space Heartbeat Dynamics Model

S Liu, AS Perley, TP Coleman

2024 46th Annual International Conference of the IEEE Engineering in …, 2024

2024

A mutual information measure of phase-amplitude coupling using gamma generalized linear models

AS Perley, TP Coleman

Frontiers in Computational Neuroscience 18, 1392655, 2024

2024

Spontaneous enteric nervous system activity generates contractile patterns prior to maturation of gastrointestinal motility

LB Dershowitz, H Bueno Garcia, AS Perley, TP Coleman, JA Kaltschmidt

Neurogastroenterology & Motility, e14890, 2024

2024

Machine Learning Methods to Track Dynamic Facial Function in Facial Palsy

AA Rao, JJ Greene, TP Coleman

medRxiv, 2024.03. 16.24304357, 2024

2024

Noninvasive multichannel urodynamic system: Obtaining cutaneous electrical signals from the human urinary bladder

JF Kurniawan, S Lee, HK Le, AKL Nguyen, NLJ Sit, T Pham, B Tjhia, ...

Lifestyle Medicine 5 (1), e93, 2024

2024

Exploring the gut-brain connection in gastroparesis with autonomic and gastric myoelectric monitoring

S Subramanian, DC Kunkel, L Nguyen, TP Coleman

IEEE Transactions on Biomedical Engineering 70 (12), 3342-3353, 2023

2023

A Convex Formulation of Point Process Heartbeat Dynamics using a Gamma Generalized Linear Model

A Perley, S Subramanian, TP Coleman

2023 IEEE 19th International Conference on Body Sensor Networks (BSN), 1-5, 2023

2023

Light-Guided Rabies Virus Tracing for Neural Circuit Analysis

S Zhang, Y Ma, W Ngamkanjanarat, S Takahashi, D Gibbs, T Coleman, ...

bioRxiv, 2023.03. 04.531104, 2023

2023

Differentiation of Bolus Texture During Deglutition via High‐Density Surface Electromyography: A Pilot Study

G Ornelas, H Bueno Garcia, DJ Bracken, K Linnemeyer‐Risser, ...

The Laryngoscope 133 (10), 2695-2703, 2023

2023

Systems and Methods for Using Triaxial Accelerometer Data for Sleep Monitoring

T Coleman, S Subramanian

US Patent App. 18/299,595, 2023

2023

Exploring the aperiodic nature of parasympathetic activity during sleep in idiopathic gastroparesis

S Subramanian, DC Kunkel, TP Coleman

2023 45th Annual International Conference of the IEEE Engineering in …, 2023

2023

Editorial Special Issue on Causality: Fundamental Limits and Applications

N Kiyavash, E Bareinboim, T Coleman, A Dimakis, B Schlkopf, P Spirtes, ...

IEEE Journal on Selected Areas in Information Theory 4, iv-iv, 2023

2023

Peripheral nerve magnetoneurography with optically pumped magnetometers

Y Bu, J Prince, H Mojtahed, D Kimball, V Shah, T Coleman, M Sarkar, ...

Frontiers in Physiology 13, 284, 2022

2022

Robust regression and optimal transport methods to predict gastrointestinal disease etiology from high resolution EGG and symptom severity

AS Agrusa, DC Kunkel, TP Coleman

IEEE Transactions on Biomedical Engineering 69 (11), 3313-3325, 2022

2022

Simultaneous Gut-Brain Electrophysiology Shows Cognition and Satiety Specific Coupling

PP Balasubramani, A Walke, G Grennan, A Perley, S Purpura, ...

Sensors 22 (23), 9242, 2022

2022

Electrochemical performance study of Ag/AgCl and Au flexible electrodes for unobtrusive monitoring of human biopotentials

JF Kurniawan, AB Allegra, T Pham, AKL Nguyen, NLJ Sit, B Tjhia, AJ Shin, ...

Nano Select 3 (8), 1277-1287, 2022

2022

Non-Nutritive Suckling System for Real-Time Characterization of Intraoral Vacuum Profile in Full Term Neonates

P Truong, E Walsh, VP Scott, T Coleman, G Tilvawala, J Friend

IEEE Journal of Translational Engineering in Health and Medicine 11, 107-115, 2022

2022

A flexible adhesive surface electrode array capable of cervical electroneurography during a sequential autonomic stress challenge

Y Bu, JF Kurniawan, J Prince, AKL Nguyen, B Ho, NLJ Sit, T Pham, ...

Scientific Reports 12 (1), 19467, 2022

2022

Wireless Heart Sensor for Capturing Cardiac Orienting Response for Prediction of Neurodevelopmental Delay in Infants

M Aguilar-Rivera, JA Kable, L Yevtushok, Y Kulikovsky, ...

Sensors 22 (23), 9140, 2022

2022

Modeling relationships between rhythmic processes and neuronal spike timing

PD Rivière, G Schamberg, TP Coleman, LM Rangel

Journal of Neurophysiology 128 (3), 593-610, 2022

2022

Automated classification of sleep and wake from single day triaxial accelerometer data

S Subramanian, TP Coleman

2022 44th Annual International Conference of the IEEE Engineering in …, 2022

2022

A Mutual Information Measure of Phase-Amplitude Coupling using High Dimensional Sparse Models

A Perley, TP Coleman

2022 44th Annual International Conference of the IEEE Engineering in …, 2022

2022

Measurement of Cervical Neuronal Activity during Stress Challenge Using Novel Flexible Adhesive Surface Electrodes

Y Bu, JF Kurniawa, J Prince, AKL Nguyen, B Ho, NLJ Sit, T Pham, VM Wu, ...

bioRxiv, 2022.07. 10.499484, 2022

2022

Adherence-independent home health monitor system

K King, N Harrington, T Coleman

US Patent App. 17/419,662, 2022

2022

Tunable, flexible and stretchable adhesive-integrated antenna

TP Coleman, HAJO Amr, YS Kim

US Patent 11,154,231, 2021

2021

Statistical uncertainty quantification to augment clinical decision support: a first implementation in sleep medicine

DY Kang, PN DeYoung, J Tantiongloc, TP Coleman, RL Owens

NPJ digital medicine 4 (1), 142, 2021

2021

An adhesive‐integrated stretchable silver‐silver chloride electrode Array for unobtrusive monitoring of gastric neuromuscular activity

JF Kurniawan, B Tjhia, VM Wu, A Shin, NLJ Sit, T Pham, A Nguyen, C Li, ...

Advanced Materials Technologies 6 (5), 2001229, 2021

2021

Passive longitudinal weight and cardiopulmonary monitoring in the home bed

N Harrington, QM Bui, Z Wei, B Hernandez-Pacheco, PN DeYoung, ...

Scientific reports 11 (1), 24376, 2021

2021

Building a simple and versatile illumination system for optogenetic experiments

P Kyriakakis, LF de Cossio, PW Howard, S Kouv, M Catanho, VJ Hu, ...

Journal of visualized experiments: JoVE, 10.3791/61914, 2021

2021

Miniaturized wireless gastric pacing via inductive power transfer with non-invasive monitoring using cutaneous Electrogastrography

A Perley, M Roustaei, M Aguilar-Rivera, DC Kunkel, TK Hsiai, ...

Bioelectronic medicine 7, 1-8, 2021

2021

Systems and methods for sensory and cognitive profiling

TP Coleman, R Ma, S Kim, C Park, RG Da Costa, R Fung, D Mesa

US Patent 10,891,313, 2021

2021

Macrophage calcium reporter mice reveal immune cell communication in vitro and in vivo

N Taghdiri, DM Calcagno, Z Fu, K Huang, RH Kohler, R Weissleder, ...

Cell reports methods 1 (8), 2021

2021

Sampling, variational Bayesian inference, and conditioned stochastic differential equations

TP Coleman, M Raginsky

2021 60th IEEE Conference on Decision and Control (CDC), 3054-3059, 2021

2021

Detection of Small Fiber Neuronal Activity with Optically Pumped Magnetometers

Y Bu, A Borna, P Schwindt, X Zeng, E Baum, R Rao, D Kimball, V Shah, ...

bioRxiv, 2021.05. 18.444539, 2021

2021

Unobtrusive wireless electronic systems for monitoring and facilitating patient compliance

TP Coleman, RN Weinreb, YS Kim, M Bajema, K Dae, AH Omar

US Patent 11,185,468, 2021

2021

System and method for biosynthesis

TP Coleman, M Catanho, P Kyriakakis

US Patent 11,021,723, 2021

2021

Fabrication of flexible electronic devices

TP Coleman, K Dae, YS Kim, M Sinha

US Patent 10,582,618, 2020

2020

Smart electronic eyedrop bottle for unobtrusive monitoring of glaucoma medication adherence

M Aguilar-Rivera, DT Erudaitius, VM Wu, JC Tantiongloc, DY Kang, ...

Sensors 20 (9), 2570, 2020

2020

Interoceptive insular cortex participates in sensory processing of gastrointestinal malaise and associated behaviors

M Aguilar-Rivera, S Kim, TP Coleman, PE Maldonado, F Torrealba

Scientific reports 10 (1), 21642, 2020

2020

Data-driven noise modeling of digital DNA melting analysis enables prediction of sequence discriminating power

L Langouche, A Aralar, M Sinha, SM Lawrence, SI Fraley, TP Coleman

Bioinformatics 36 (22-23), 5337-5343, 2020

2020

Direct and indirect effects—an information theoretic perspective

G Schamberg, W Chapman, SP Xie, TP Coleman

Entropy 22 (8), 854, 2020

2020

Robust methods to detect abnormal initiation in the gastric slow wave from cutaneous recordings

AS Agrusa, AB Allegra, DC Kunkel, TP Coleman

2020 42nd Annual International Conference of the IEEE Engineering in …, 2020

2020

Minimax lower bounds for circular source localization

A Xu, T Coleman

2020 IEEE International Symposium on Information Theory (ISIT), 1242-1247, 2020

2020

Bedscales: a non-contact adherence-independent multi-person sensor for longitudinal physiologic monitoring in the home bed

N Harrington, Z Wei, B Hernandez-Pacheco, Q Bui, PN DeYoung, ...

BioRxiv, 2020.03. 31.018523, 2020

2020

THE USE OF INFANT CARDIAC ORIENTING RESPONSE AND MACHINE LEARNING TO PREDICT NEURODEVELOPMENTAL RISK

TP Coleman, MA Rivera, CD Coles, KL Jones, L Yevtushok, Y Kulikovsky, ...

ALCOHOLISM-CLINICAL AND EXPERIMENTAL RESEARCH 44, 77-77, 2020

2020

Su1356 STRETCHABLE ADHESIVE-INTEGRATED ELECTRONICS FOR MULTIELECTRODE CUTANEOUS GASTRIC SLOW WAVE MONITORING

JF Kurniawan, AS Agrusa, V Wu, IR Lerman, DC Kunkel, TP Coleman

Gastroenterology 158 (6), S-563-S-564, 2020

2020

Spatial patterns from high-resolution electrogastrography correlate with severity of symptoms in patients with functional dyspepsia and gastroparesis

AA Gharibans, TP Coleman, H Mousa, DC Kunkel

Clinical Gastroenterology and Hepatology 17 (13), 2668-2677, 2019

2019

Configuration and spatial placement of frontal electrode sensors to detect physiological signals

TP Coleman, R Ma, M Bajema, RG Da Costa, R Fung

US Patent 10,182,736, 2019

2019

Systems and methods for evaluation of neuropathologies

TP Coleman, M Mendoza, J Tantiongloc, RG Da Costa, TD Albright, ...

US Patent 10,258,291, 2019

2019

A distributed framework for the construction of transport maps

DA Mesa, J Tantiongloc, M Mendoza, S Kim, T P. Coleman

Neural computation 31 (4), 613-652, 2019

2019

A deep convolutional neural network approach to classify normal and abnormal gastric slow wave initiation from the high resolution electrogastrogram

AS Agrusa, AA Gharibans, AA Allegra, DC Kunkel, TP Coleman

IEEE transactions on biomedical engineering 67 (3), 854-867, 2019

2019

High‐density surface electromyography: A visualization method of laryngeal muscle activity

DJ Bracken, G Ornelas, TP Coleman, PA Weissbrod

The Laryngoscope 129 (10), 2347-2353, 2019

2019

Bayesian inverse methods for spatiotemporal characterization of gastric electrical activity from cutaneous multi-electrode recordings

AB Allegra, AA Gharibans, GE Schamberg, DC Kunkel, TP Coleman

PloS one 14 (10), e0220315, 2019

2019

Measuring sample path causal influences with relative entropy

G Schamberg, TP Coleman

IEEE Transactions on Information Theory 66 (5), 2777-2798, 2019

2019

Scalable fabrication techniques and circuit packaging devices

TP Coleman, YS Kim, M Bajema, RN Weinreb

US Patent 10,506,715, 2019

2019

A flexible likelihood approach for predicting neural spiking activity from oscillatory phase

TD Johnson, TP Coleman, LM Rangel

Journal of neuroscience methods 311, 307-317, 2019

2019

On the bias of directed information estimators

G Schamberg, TP Coleman

2019 IEEE International Symposium on Information Theory (ISIT), 186-190, 2019

2019

Construction and analysis of posterior matching in arbitrary dimensions via optimal transport

DA Mesa, R Ma, SK Gorantla, TP Coleman

arXiv preprint arXiv:1901.02523, 2019

2019

490 High-Resolution Electrogastrogram Identifies Disturbed Gastric Slow Waves and Dysautonomia in Subjects With Dumping Syndrome

A Kabadi, TP Coleman, HS Greenwald, DC Kunkel

Official journal of the American College of Gastroenterology| ACG 114, S283-S285, 2019

2019

High-Resolution Electrogastrogram Identifies Disturbed Gastric Slow Waves and Dysautonomia in Subjects With Dumping Syndrome

A Kabadi, TP Coleman, HS Greenwald, DC Kunkel

AMERICAN JOURNAL OF GASTROENTEROLOGY 114, S284-S285, 2019

2019

Solid phase sequence-independent nucleic acid assembly

TP Coleman, P Kyriakakis

US Patent 10,407,460, 2019

2019

MONITORING ELECTRICAL SIGNAL OF THE HEALTHY HUMAN BLADDER: A STEPPING STONE TO DEVELOP A HIGH-RESOLUTION, NON-INVASIVE URODYNAMIC STUDY

S Lee, H Le, T Coleman, T Mendoza, T DiPina, G Chiang, G Ornelas, ...

NEUROUROLOGY AND URODYNAMICS 38, S41-S42, 2019

2019

MP07-02 A PILOT TRIAL TO EVALUATE A HIGH-RESOLUTION, NON-INVASIVE URODYNAMIC STUDY TO MONITOR ELECTRICAL ACTIVITY OF THE HUMAN BLADDER

S Lee, HK Le, T Coleman, T Mendoza, T DiPina, G Chiang, G Ornelas, ...

Journal of Urology 201, e90, 2019

2019

Emerging technologies for molecular diagnosis of sepsis

M Sinha, J Jupe, H Mack, TP Coleman, SM Lawrence, SI Fraley

Clinical microbiology reviews 31 (2), 10.1128/cmr. 00089-17, 2018

2018

Artifact rejection methodology enables continuous, noninvasive measurement of gastric myoelectric activity in ambulatory subjects

AA Gharibans, BL Smarr, DC Kunkel, LJ Kriegsfeld, HM Mousa, ...

Scientific reports 8 (1), 5019, 2018

2018

Biosynthesis of Orthogonal Molecules Using Ferredoxin and Ferredoxin-NADP+ Reductase Systems Enables Genetically Encoded PhyB Optogenetics

P Kyriakakis, M Catanho, N Hoffner, W Thavarajah, VJ Hu, SS Chao, ...

ACS Synthetic Biology 7 (2), 706-717, 2018

2018

Systems and methods for sensory and cognitive profiling

TP Coleman, R Ma, S Kim, C Park, RG Da Costa, R Fung, D Mesa

US Patent 9,886,493, 2018

2018

In-home sleep recordings in military veterans with posttraumatic stress disorder reveal less REM and deep sleep< 1 Hz

JA Onton, SC Matthews, DY Kang, TP Coleman

Frontiers in human neuroscience 12, 196, 2018

2018

A high-resolution digital DNA melting platform for robust sequence profiling and enhanced genotype discrimination

M Sinha, H Mack, TP Coleman, SI Fraley

SLAS TECHNOLOGY: Translating Life Sciences Innovation 23 (6), 580-591, 2018

2018

A modularized efficient framework for non-Markov time series estimation

G Schamberg, D Ba, TP Coleman

IEEE Transactions on Signal Processing 66 (12), 3140-3154, 2018

2018

The activity of discrete sets of neurons in the posterior insula correlates with the behavioral expression and extinction of conditioned fear

JP Casanova, M Aguilar-Rivera, MÁ Rodríguez, TP Coleman, F Torrealba

Journal of Neurophysiology 120 (4), 1906-1913, 2018

2018

High-density multichannel electrode Array improves the accuracy of cutaneous electrogastrography across subjects with wide-ranging BMI: 1235

AA Gharibans, T Coleman, H Mousa, D Kunkel

Official journal of the American College of Gastroenterology| ACG 113, S708, 2018

2018

A distributed framework for the construction of transport maps

DA Mesa, J Tantiongloc, M Mendoza, TP Coleman

arXiv preprint arXiv:1801.08454, 2018

2018

Bayesian Lasso posterior sampling via parallelized measure transport

M Mendoza, A Allegra, TP Coleman

arXiv preprint arXiv:1801.02106, 2018

2018

A sample path measure of causal influence

G Schamberg, TP Coleman

2018 IEEE International Symposium on Information Theory (ISIT), 2251-2255, 2018

2018

Gastric slow wave spatial abnormalities are present and associated with cannabinoid hyperemesis syndrome among daily cannabis users: 473

AA Gharibans, T Coleman, D Kunkel

Official journal of the American College of Gastroenterology| ACG 113, S273, 2018

2018

Quantifying Context-Dependent Causal Influences

G Schamberg, TP Coleman

Proc. NeurIPS, 10, 2018

2018

Gastric Slow Wave Spatial Abnormalities Are Present and Associated with Cannabinoid Hyperemesis Syndrome Among Daily Cannabis Users

AA Gharibans, T Coleman, D Kunkel

AMERICAN JOURNAL OF GASTROENTEROLOGY 113, S272-S272, 2018

2018

Abnormalities of Gastric Slow Wave Propagation on Cutaneous High Resolution Electrogastrogram Are Associated with More Severe Clinical Symptoms: 1234

AA Gharibans, T Coleman, H Mousa, D Kunkel

Official journal of the American College of Gastroenterology| ACG 113, S708, 2018

2018

Sequence-independent nucleic acid assembly

TP Coleman, P Kyriakakis

US Patent App. 15/746,371, 2018

2018

EARLY IDENTIFICATION OF EFFECTS OF PRENATAL ALCOHOL EXPOSURE: INFANT CARDIAC ORIENTING RESPONSE AS A BIOMARKER

CD Coles, JA Kable, DA Mesa, TP Coleman, KL Jones, L Yevtushok, ...

ALCOHOLISM-CLINICAL AND EXPERIMENTAL RESEARCH 42, 296A-296A, 2018

2018

Epoch-by-Epoch Uncertainty Quantification to Augment Automated Sleep Architecture Estimation

D Kang, PN DeYoung, A Malhotra, TP Coleman, RL Owens

B68. DIAGNOSIS AND TREATMENT OF SLEEP DISORDERED BREATHING, A3972-A3972, 2018

2018

Scalable manufacturing of solderable and stretchable physiologic sensing systems

YS Kim, J Lu, B Shih, A Gharibans, Z Zou, K Matsuno, R Aguilera, Y Han, ...

Advanced Materials 29 (39), 1701312, 2017

2017

A state space and density estimation framework for sleep staging in obstructive sleep apnea

DY Kang, PN DeYoung, A Malhotra, RL Owens, TP Coleman

IEEE Transactions on Biomedical Engineering 65 (6), 1201-1212, 2017

2017

The use of cardiac orienting responses as an early and scalable biomarker of alcohol‐related neurodevelopmental impairment

DA Mesa, JA Kable, CD Coles, KL Jones, L Yevtushok, Y Kulikovsky, ...

Alcoholism: Clinical and Experimental Research 41 (1), 128-138, 2017

2017

Epidermal electrode technology for detecting ultrasonic perturbation of sensory brain activity

S Huang, JAN Fisher, M Ye, YS Kim, R Ma, M Nabili, V Krauthamer, ...

IEEE Transactions on Biomedical Engineering 65 (6), 1272-1280, 2017

2017

The use of cardiac orienting responses as an early and scalable biomarker of alcohol-related neurodevelopmental impairment in later age children

DA Mesa, JA Kable, CD Coles, L Yevtushok, Y Kulikovsky, W Wertelecki, ...

ALCOHOLISM-CLINICAL AND EXPERIMENTAL RESEARCH 41, 57A-57A, 2017

2017

Dynamical systems, ergodicity, and posterior matching

TP Coleman

2017 IEEE International Symposium on Information Theory (ISIT), 2678-2682, 2017

2017

Accelerated brain aging in bipolar disorder

L Eyler, L Ge, S Dev, T Nguyen, J Tantiongloc, T Coleman, X Tu

BIPOLAR DISORDERS 19, 79-80, 2017

2017

A Kernel-Based Hidden Markov Model Utilizing Single-Channel Sleep Eeg For Automated Assessment Of Sleep Architecture

DY Kang, PN DeYoung, A Malhotra, RL Owens, TP Coleman

C109. NEW TECHNOLOGY IN SLEEP: DIAGNOSTICS AND THERAPEUTICS, A6959-A6959, 2017

2017

C109 NEW TECHNOLOGY IN SLEEP: DIAGNOSTICS AND THERAPEUTICS: A Kernel-Based Hidden Markov Model Utilizing Single-Channel Sleep Eeg For Automated Assessment Of Sleep Architecture

DY Kang, PN DeYoung, A Malhotra, RL Owens, TP Coleman

American Journal of Respiratory and Critical Care Medicine 195, 2017

2017

High-resolution electrogastrogram: a novel, noninvasive method for determining gastric slow-wave direction and speed

AA Gharibans, S Kim, DC Kunkel, TP Coleman

IEEE Transactions on Biomedical Engineering 64 (4), 807-815, 2016

2016

Learning minimal latent directed information polytrees

J Etesami, N Kiyavash, T Coleman

Neural computation 28 (9), 1723-1768, 2016

2016

An information and control framework for optimizing user-compliant human–computer interfaces

J Tantiongloc, DA Mesa, R Ma, S Kim, CH Alzate, JJ Camacho, V Manian, ...

Proceedings of the IEEE 105 (2), 273-285, 2016

2016

Stretchable and flexible adhesive-integrated antenna for biomedical applications

A Haj-Omar, WL Thompson, YS Kim, P Glick, M Tolley, TP Coleman

2016 IEEE International Symposium on Antennas and Propagation (APSURSI), 459-460, 2016

2016

Adaptive flexible antennas for wireless biomedical applications

A Haj-Omar, WL Thompson, YS Kim, TP Coleman

2016 IEEE 17th annual wireless and microwave technology conference (WAMICON …, 2016

2016

Grand challenges for global brain sciences

JT Vogelstein, K Amunts, A Andreou, D Angelaki, G Ascoli, C Bargmann, ...

arXiv preprint arXiv:1608.06548, 2016

2016

Efficient low-rank spectrotemporal decomposition using ADMM

G Schamberg, D Ba, M Wagner, T Coleman

2016 IEEE Statistical Signal Processing Workshop (SSP), 1-5, 2016

2016

Diffeomorphism learning via relative entropy constrained optimal transport

TP Coleman, J Tantiongloc, A Allegra, D Mesa, D Kang, M Mendoza

2016 IEEE Global Conference on Signal and Information Processing (GlobalSIP …, 2016

2016

Timing Channel: Achievable Rate in the Finite Block-Length Regime

TJ Riedl, TP Coleman, AC Singer

arXiv preprint arXiv:1605.07905, 2016

2016

Directed information graphs

CJ Quinn, N Kiyavash, TP Coleman

IEEE Transactions on information theory 61 (12), 6887-6909, 2015

2015

Large-scale spatiotemporal spike patterning consistent with wave propagation in motor cortex

K Takahashi, S Kim, TP Coleman, KA Brown, AJ Suminski, MD Best, ...

Nature communications 6 (1), 7169, 2015

2015

Scalable microfabrication procedures for adhesive-integrated flexible and stretchable electronic sensors

DY Kang, YS Kim, G Ornelas, M Sinha, K Naidu, TP Coleman

Sensors 15 (9), 23459-23476, 2015

2015

Bayesian LASSO in a distributed architecture

M Mendoza, S Kim, TP Coleman

2015 IEEE Global Conference on Signal and Information Processing (GlobalSIP …, 2015

2015

Detecting Ultrasound-Induced Brain Injury in the Mouse with a Novel Flexible Epidermal Electrode Array

S Huang, JAN Fisher, M Ye, M Nabili, Y Kim, R Ma, YS Kim, T Coleman, ...

NEUROTHERAPEUTICS 12 (3), 683-684, 2015

2015

Efficient total probability prediction via convex optimization and optimal transport

S Kim, D Mesa, T Coleman

2015 IEEE International Symposium on Information Theory (ISIT), 681-685, 2015

2015

Fractal design concepts for stretchable electronics

JA Fan, WH Yeo, Y Su, Y Hattori, W Lee, SY Jung, Y Zhang, Z Liu, ...

Nature communications 5 (1), 3266, 2014

2014

An optimizer's approach to stochastic control problems with nonclassical information structures

AA Kulkarni, TP Coleman

IEEE Transactions on Automatic Control 60 (4), 937-949, 2014

2014

EEG gamma band oscillations differentiate the planning of spatially directed movements of the arm versus eye: multivariate empirical mode decomposition analysis

C Park, M Plank, J Snider, S Kim, HC Huang, S Gepshtein, TP Coleman, ...

IEEE transactions on neural systems and rehabilitation engineering 22 (5 …, 2014

2014

Dynamic and succinct statistical analysis of neuroscience data

S Kim, CJ Quinn, N Kiyavash, TP Coleman

Proceedings of the IEEE 102 (5), 683-698, 2014

2014

Necessary and sufficient conditions for reliability of posterior matching in arbitrary dimensions

R Ma, TP Coleman

2014 IEEE International Symposium on Information Theory, 2366-2370, 2014

2014

Sensing Nerve Regeneration with Implantable Flexible Electronics

LT Nguyen, M Bajema, J Chung, PA Weissbrod, TP Coleman, QT Nguyen

Otolaryngology—Head and Neck Surgery 151 (1_suppl), P227-P227, 2014

2014

Smart Skin Sensors and Analytics in the Cloud to Advance the Frontiers of Wearable Health

TP Coleman

BIRTH DEFECTS RESEARCH PART A-CLINICAL AND MOLECULAR TERATOLOGY 100 (5), 370-370, 2014

2014

USING GOOGLE GLASS AS A NOVEL PLATFORM FOR INTERACTION WITH AND ANALYSIS OF THE DIABETES DATA ECOSYSTEM

ND Heintzman, S Pai, JC Tantiongloc, SV Edelman, T Starner, ...

DIABETES TECHNOLOGY & THERAPEUTICS 16, A113-A114, 2014

2014

Grand challenges in mapping the human brain: NSF workshop report

B He, T Coleman, GM Genin, G Glover, X Hu, N Johnson, T Liu, S Makeig, ...

IEEE transactions on Biomedical engineering 60 (11), 2983-2992, 2013

2013

Efficient methods to compute optimal tree approximations of directed information graphs

CJ Quinn, N Kiyavash, TP Coleman

IEEE Transactions on Signal Processing 61 (12), 3173-3182, 2013

2013

A timing channel spyware for the CSMA/CA protocol

N Kiyavash, F Koushanfar, TP Coleman, M Rodrigues

IEEE Transactions on Information Forensics and Security 8 (3), 477-487, 2013

2013

Efficient Bayesian inference methods via convex optimization and optimal transport

S Kim, R Ma, D Mesa, TP Coleman

2013 IEEE International Symposium on Information Theory, 2259-2263, 2013

2013

Demonstration of the Use of Epidermal Electronics in Neurological Monitoring.

MJ Harbert, SS Rosenberg, D Mesa, M Sinha, NP Karanjia, M Nespeca, ...

Annals of Neurology 74, S76-S77, 2013

2013

Robust directed tree approximations for networks of stochastic processes

CJ Quinn, J Etesami, N Kiyavash, TP Coleman

2013 IEEE International Symposium on Information Theory, 2254-2258, 2013

2013

NOVEL EPIDERMAL ELECTRONICS (EES) METHODOLOGY TO CAPTURE EVENT-RELATED BRAIN POTENTIALS (ERP)

T Coleman, R Ma, R Fung, M Bajema, T Albright, J Rogers, RG da Costa

JOURNAL OF COGNITIVE NEUROSCIENCE, 143-143, 2013

2013

Circadian rhythm of redox state regulates excitability in suprachiasmatic nucleus neurons

TA Wang, YV Yu, G Govindaiah, X Ye, L Artinian, TP Coleman, ...

Science 337 (6096), 839-842, 2012

2012

Bit-wise unequal error protection for variable-length block codes with feedback

B Nakiboğlu, SK Gorantla, L Zheng, TP Coleman

IEEE transactions on information theory 59 (3), 1475-1504, 2012

2012

Practical sensor management for an energy-limited detection system

DM Jun, DL Jones, TP Coleman, WJ Leonard, R Ratnam

2012 IEEE International Conference on Acoustics, Speech and Signal …, 2012

2012

Clustering large networks of parametric dynamic generative models

Y Xu, S Kim, SM Salapaka, CL Beck, TP Coleman

2012 IEEE 51st IEEE Conference on Decision and Control (CDC), 5248-5253, 2012

2012

Granger causality analysis of state dependent functional connectivity of neurons in orofacial motor cortex during chewing and swallowing

K Takahashi, L Pesce, J Iriarte-Díaz, M Best, S Kim, TP Coleman, ...

The 6th International Conference on Soft Computing and Intelligent Systems …, 2012

2012

Granger causality analysis of functional connectivity of spiking neurons in orofacial motor cortex during chewing and swallowing

K Takahashi, L Pesce, J Iriarte-Díaz, S Kim, TP Coleman, ...

2012 Annual International Conference of the IEEE Engineering in Medicine and …, 2012

2012

Epidermal electronics

DH Kim, N Lu, R Ma, YS Kim, RH Kim, S Wang, J Wu, SM Won, H Tao, ...

science 333 (6044), 838-843, 2011

2011

Estimating the directed information to infer causal relationships in ensemble neural spike train recordings

CJ Quinn, TP Coleman, N Kiyavash, NG Hatsopoulos

Journal of computational neuroscience 30, 17-44, 2011

2011

Characterizing the efficacy of the NRL network pump in mitigating covert timing channels

SK Gorantla, S Kadloor, N Kiyavash, TP Coleman, IS Moskowitz, ...

IEEE Transactions on Information Forensics and Security 7 (1), 64-75, 2011

2011

Equivalence between minimal generative model graphs and directed information graphs

CJ Quinn, N Kiyavash, TP Coleman

2011 IEEE International Symposium on Information Theory Proceedings, 293-297, 2011

2011

Generalizing the posterior matching scheme to higher dimensions via optimal transportation

R Ma, TP Coleman

2011 49th Annual Allerton Conference on Communication, Control, and …, 2011

2011

A mixed-filter algorithm for dynamically tracking learning from multiple behavioral and neurophysiological measures

TP Coleman, M Yanike, WA Suzuki, EN Brown

The dynamic brain: An exploration of neuronal variability and its functional …, 2011

2011

Information-theoretic viewpoints on optimal causal coding-decoding problems

S Gorantla, T Coleman

arXiv preprint arXiv:1102.0250, 2011

2011

Finite block-length achievable rates for queuing timing channels

TJ Riedl, TP Coleman, AC Singer

2011 IEEE Information Theory Workshop, 200-204, 2011

2011

A stochastic control approach to optimally designing hierarchical flash sets in P300 communication prostheses

R Ma, N Aghasadeghi, J Jarzebowski, T Bretl, TP Coleman

IEEE transactions on neural systems and rehabilitation engineering 20 (1 …, 2011

2011

A message-passing approach to combating desynchronization attacks

S Sadasivam, P Moulin, TP Coleman

IEEE Transactions on Information Forensics and Security 6 (3), 894-905, 2011

2011

A generalized prediction framework for Granger causality

CJ Quinn, TP Coleman, N Kiyavash

2011 IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS …, 2011

2011

Equivalence between reliable feedback communication and nonlinear filter stability

S Gorantla, TP Coleman

2011 IEEE International Symposium on Information Theory Proceedings, 164-168, 2011

2011

Information transfer between neurons in the motor cortex triggered by visual cues

S Kim, K Takahashi, NG Hatsopoulos, TP Coleman

2011 Annual International Conference of the IEEE Engineering in Medicine and …, 2011

2011

Team decision theory and brain-machine interfaces

S Kim, TP Coleman

2011 5th International IEEE/EMBS Conference on Neural Engineering, 605-608, 2011

2011

A minimal approach to causal inference on topologies with bounded indegree

C Quinn, N Kiyavash, T Coleman

2011 50th IEEE Conference on Decision and Control and European Control …, 2011

2011

A memoryless channel coding methodology for infinite-memory queuing timing channels

C Li, T Cheng, TP Coleman

2011 IEEE International Symposium on Information Theory Proceedings, 713-717, 2011

2011

Assessing time-varying causality network of ensemble neural spiking activity

S Kim, M Aguilar, TP Coleman

BMC Neuroscience 12 (Suppl 1), P43, 2011

2011

Special session on information theory and neuroscience at ISIT 2011

TP Coleman, AA Lazar

2011 IEEE International Symposium on Information Theory Proceedings, 1462-1463, 2011

2011

A feedback information-theoretic approach to the design of brain-computer interfaces

C Omar, A Akce, M Johnson, T Bretl, R Ma, E Maclin, M McCormick, ...

Intl. Journal of Human-Computer Interaction 27 (1), 5-23, 2010

2010

A stretchable electrode array for non-invasive, skin-mounted measurement of electrocardiography (ECG), electromyography (EMG) and electroencephalography (EEG)

R Ma, DH Kim, M McCormick, T Coleman, J Rogers

2010 Annual International Conference of the IEEE Engineering in Medicine and …, 2010

2010

Introduction to the special issue on information theory in molecular biology and neuroscience

O Milenkovic, G Alterovitz, G Battail, TP Coleman, J Hagenauer, SP Meyn, ...

Institute of Electrical and Electronics Engineers, 2010

2010

An analytic spatial filter and a hidden Markov model for enhanced information transfer rate in EEG-based brain computer interfaces

M McCormick, R Ma, TP Coleman

2010 IEEE International Conference on Acoustics, Speech and Signal …, 2010

2010

On reversible Markov chains and maximization of directed information

SK Gorantla, TP Coleman

2010 IEEE International Symposium on Information Theory, 216-220, 2010

2010

A dynamical point process model of auditory nerve spiking in response to complex sounds

A Trevino, TP Coleman, J Allen

Journal of computational neuroscience 29, 193-201, 2010

2010

Approximating discrete probability distributions with causal dependence trees

CJ Quinn, TP Coleman, N Kiyavash

2010 International Symposium On Information Theory & Its Applications, 100-105, 2010

2010

Source coding with feedforward using the posterior matching scheme

HJ Ebeid, TP Coleman

2010 IEEE International Symposium on Information Theory, 96-100, 2010

2010

Mutual information saddle points in channels of exponential family type

TP Coleman, M Raginsky

2010 IEEE International Symposium on Information Theory, 1355-1359, 2010

2010

A stochastic control approach to coding with feedback over degraded broadcast channels

SK Gorantla, TP Coleman

49th IEEE Conference on Decision and Control (CDC), 1516-1521, 2010

2010

Bit-wise unequal error protection for variable length blockcodes with feedback

SK Gorantla, B Nakiboğlu, TP Coleman, L Zheng

2010 IEEE International Symposium on Information Theory, 241-245, 2010

2010

A necessary condition for reliable communication with feedback based upon Lyapunov exponents of dynamical systems

HJ Ebeid, SK Gorantla, TP Coleman

2010-MILCOM 2010 MILITARY COMMUNICATIONS CONFERENCE, 1660-1665, 2010

2010

A Markov chain model of the evolution of complex neuronal network structures in the presence of plasticity

N Arizumi, TP Coleman, RL DeVille

BMC Neuroscience 11 (Suppl 1), P61, 2010

2010

A stochastic control viewpoint on 'posterior matching'-style feedback communication schemes

TP Coleman

2009 IEEE International Symposium on Information Theory, 1520-1524, 2009

2009

Covert timing channels codes for communication over interactive traffic

N Kiyavash, T Coleman

2009 IEEE International Conference on Acoustics, Speech and Signal …, 2009

2009

Joint source–channel coding for transmitting correlated sources over broadcast networks

TP Coleman, E Martinian, E Ordentlich

IEEE Transactions on Information Theory 55 (8), 3864-3868, 2009

2009

A simple memoryless proof of the capacity of the exponential server timing channel

TP Coleman

2009 IEEE Information Theory Workshop on Networking and Information Theory …, 2009

2009

Mutual information and posterior estimates in channels of exponential family type

M Raginsky, TP Coleman

2009 IEEE Information Theory Workshop, 399-403, 2009

2009

On the channel capacity of network flow watermarking

A Houmansadr, T Coleman, N Kiyavash, N Borisov

Proceedings of 16th ACM conference on computer and communications security …, 2009

2009

Encoding and Decoding Messages on Noisy Timing Channels

TP Coleman, N Kiyavash

US Patent App. 12/178,163, 2009

2009

A low-complexity universal scheme for rate-constrained distributed regression using a wireless sensor network

AL Fernandes, M Raginsky, TP Coleman

IEEE transactions on signal processing 57 (5), 1731-1744, 2009

2009

The parabigeminal nucleus as a recursive estimator

R Ma, T Coleman, J Malpeli

Proceedings of the 48h IEEE Conference on Decision and Control (CDC) held …, 2009

2009

Practical codes for queueing channels: An algebraic, state-space, message-passing approach

TP Coleman, N Kiyavash

2008 IEEE Information Theory Workshop, 318-322, 2008

2008

The rate-distortion function of a Poisson process with a queueing distortion measure

TP Coleman, N Kiyavash, VG Subramanian

Data Compression Conference (dcc 2008), 63-72, 2008

2008

Querying the user properly for high-performance brain-machine interfaces: Recursive estimation, control, and feedback information-theoretic perspectives

C Omar, M Johnson, TW Bretl, TP Coleman

2008 IEEE International Conference on Acoustics, Speech and Signal …, 2008

2008

Using stochastic control with data compression perspectives to enhance P300 neural communication prostheses

J Jarzebowski, L Srinivasan, TP Coleman

2008 IEEE Information Theory Workshop, 109-113, 2008

2008

Policies for neural prosthetic control: initial experiments with a text interface

C Omar, M Johnson, T Bretl, T Coleman

2008 American Control Conference, 4161-4166, 2008

2008

A low-complexity universal scheme for rate-constrained distributed regression using a wireless sensor network

AL Fernandes, M Raginsky, T Coleman

2008 IEEE International Conference on Acoustics, Speech and Signal …, 2008

2008

An alternative proof of the rate-distortion function of poisson processes with a queueing distortion measure.

TP Coleman, N Kiyavash, VG Subramanian

An Alternative Proof of the Rate-Distortion, 2008

2008

Capacity-Approaching Practical Codes for Queueing Channels: An Algebraic, State-Space, Message-Passing Approach

TP Coleman, N Kiyavash

Coordinated Science Laboratory Report no. UILU-ENG-07-2209, 2007

2007

Low-complexity approaches to Slepian–Wolf near-lossless distributed data compression

TP Coleman, AH Lee, M Médard, M Effros

IEEE Transactions on Information Theory 52 (8), 3546-3561, 2006

2006

A mixed filter algorithm for state estimation from simultaneously recorded continuous-valued point process and binary observations

TP Coleman, M Yanike, W Suzuki, EN Brown

2006 Fortieth Asilomar Conference on Signals, Systems and Computers, 1949-1953, 2006

2006

On Low-Complexity Decodable Universally Good Linear Codes

TP Coleman, M Médard

invited paper, UCSD Information Theory and Applications Inaugural Workshop 5, 2006

2006

Low-complexity approaches to distributed data dissemination

TP Coleman

Massachusetts Institute of Technology, 2006

2006

Time-sharing vs. source-splitting in the Slepian-Wolf problem: Error exponents analysis

TP Coleman, M Médard, M Effros

Data Compression Conference (DCC'06), 53-62, 2006

2006

Towards practical minimum-entropy universal decoding

TP Coleman, M Médard, M Effros

Data Compression Conference, 33-42, 2005

2005

Interference management via capacity-achieving codes for the deterministic broadcast channel

TP Coleman, E Martinian, M Effros, M Médard

IEEE Information Theory Workshop, 2005., 5 pp., 2005

2005

Rate-splitting for the deterministic broadcast channel

TP Coleman, M Effros, E Martinian, M Médard

Proceedings. International Symposium on Information Theory, 2005. ISIT 2005 …, 2005

2005

Practical universal decoding for combined routing and compression in network coding

TP Coleman, M Médard, M Effros

First Workshop on Network Coding, Theory, and Applications, 2005

2005

Linear complexity universal decoding with exponential error probability decay

TP Coleman, M Medard, M Effros

2005 International Conference on Wireless Networks, Communications and …, 2005

2005

Towards bridging the gap between theory and practice for the slepian-wolf problem

TP Coleman, M Médard, M Efros

Proceedings.(ICASSP'05). IEEE International Conference on Acoustics, Speech …, 2005

2005

Capacity of time-slotted ALOHA packetized multiple-access systems over the AWGN channel

M Médard, J Huang, AJ Goldsmith, SP Meyn, TP Coleman

IEEE Transactions on Wireless Communications 3 (2), 486-499, 2004

2004

On some new approaches to practical Slepian-Wolf compression inspired by channel coding

TP Coleman, AH Lee, M Médard, M Effros

Data Compression Conference, 2004. Proceedings. DCC 2004, 282-291, 2004

2004

A distributed scheme for achieving energy-delay tradeoffs with multiple service classes over a dynamically varying network

TP Coleman, M Médard

IEEE journal on selected areas in communications 22 (5), 929-941, 2004

2004

A new source-splitting approach to the Slepian-Wolf problem

TP Coleman, AH Lee, M Médard, M Effros

International Symposium onInformation Theory, 2004. ISIT 2004. Proceedings …, 2004

2004

Polynomial complexity universal block decoding with exponential error probability decay

TP Coleman, M Médard, M Effros

submitted to IEEE Trans. Inform. Theory, 0

Grand Challenges in Mapping the Human Brain: NSF Workshop Report (Review Paper).............................

B He, T Coleman, GM Genin, G Glover, X Hu, N Johnson, T Liu, S Makeig, ...

AMIR AMINI

F BABILONI, W BESIO, J BRANKOV, S CERUTTI, ALI CINAR, YU CHEN, ...

CUNTAI GUAN

F BABILONI, W BESIO, J BRANKOV, S CERUTTI, ALI CINAR, YU CHEN, ...

AMIR AMINI

L ASTOLFI, F BABILONI, W BESIO, S CERUTTI, ALI CINAR, C COBELLI, ...

A Timing Channel Spyware Robust to MAC Random Back-off

Y Alkabani, N Kiyavash, F Koushanfar, T Coleman

Amir Amini University of Louisville Fabio Babiloni University of Rome

W Besio, J Brankov, S Cerutti, A Cinar, Y Chen, C Cobelli, TP Coleman, ...

A hidden Markov model and analytic spatial filter for enhanced information transfer rates in EEG

M McCormick, R Ma, T Coleman, A Shorter, J Ruths, S Noble, Q He, ...

The University of Illinois at Urbana-Champaign–Electrical and Computer …, 0